AboutI am a co-founder of the Data Science Group in the Division of Preventive Medicine, BWH and I lead multiple computational and analytical collaborations between BWH and HMS and national facilities including The Osher Center for Integrative Medicine BWH, HMS, The National Center for Functional Glycomics, BIDMC and the Center for Experimental Therapeutics and Reperfusion Injury, BWH.
Simplified scores to estimate risk of hospitalization and death among patients with COVID-19 based on Sex, Age, Race, Socioeconomic, Smoking status (SARS2).
Cheminformatics Tool for Probabilistic Identification of Carbohydrates (CTPIC) analyzes the covalent structure of a chemical compound to yield a probabilistic measure for distinguishing saccharides and saccharide-derivatives from non-saccharide chemical compounds.
Guided Ideographic Spin System Model Optimization (GISSMO) enables the efficient calculation and refinement of spin system matrices (chemical shift and coupling constants) against experimental 1D-1H NMR spectra of small molecules.
Atom Label Assignment Tool using InChI String (ALATIS) operates fully within the InChI convention to provide unique and reproducible molecule and all atom identifiers.
Mass to Comp
Mass2Comp is a webserver for computational assignment of glycan peaks. This is an on going collaboration with Dr. Sylvain Lehoux at The National Center for Functional Glycomics
Robust and Unique Nomenclature for Enhanced Reproducibility (RUNER) is a robust and standardized pipeline that enables seamless modifications of atom force field parameters for computational molecular dynamics, energy minimization, and modeling of molecular interactions.
Open positionsThrough different collaborations, we have openings for talented research scientists/postdocs/programmers with expertise in one of the areas of data science, machine learning, computational epidemiology, or computational genomics.
Send me your CV and your research interest statement.
- Cardiovascular Disease Initiative (CVDi), Broad Institute of MIT and Harvard
- Women's Health Study: Infrastructure support for cohort follow-up supplement U01 CA182913
- Chief’s pilot research funding award, Division of Preventive Medicine, Brigham and Women’s Hospital